SNP Detail For rs7901794
1.Mapping Information
Human SNP ID rs7901794
Human chromosome chr10
Human SNP position 63118178
Pig chromosome chr16
Pig SNP position 72045903
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region10q21.3
Chromosome idchr10
Chromosome position63118178
Reported geneNR
Mapped geneEGR2 - LOC105378328
Upstream gene id1959
Downstream gene id105378328
SNP gene ids
Upstream gene distance198283
Downstream gene distance5751
SNP risk allelers7901794-C
SNPsrs7901794
Merged
SNP id current7901794
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta1.1235955
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048