SNP Detail For rs788338
1.Mapping Information
Human SNP ID rs788338
Human chromosome chr19
Human SNP position 50275286
Pig chromosome chr6
Pig SNP position 50916576
2.Annotation Information
PubMed ID25524916
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25524916
StudyGenetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium.
Disease/TraitGlucose homeostasis traits
Initial sampleup to 4,176 Mexican American individuals
Replication sampleNA
Region19q13.33
Chromosome idchr19
Chromosome position50275286
Reported geneMYH14
Mapped geneMYH14
Upstream gene id
Downstream gene id
SNP gene ids79784
Upstream gene distance
Downstream gene distance
SNP risk allelers788338-?
SNPsrs788338
Merged0
SNP id current788338
Contextintron_variant
Intergenic0
Allele frequency
P value0.000002
Pvalue mlog5.69897000433601
P value text(SG)
Or beta0.17
%95 Ci[0.092-0.248] unit decrease
PlatformIllumina [693128]
CNVN
Mapped traitglucose homeostasis measurement, glucose effectiveness measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006896, http://www.ebi.ac.uk/efo/EFO_0006833
Study accessionGCST002726