SNP Detail For rs7875024
1.Mapping Information
Human SNP ID rs7875024
Human chromosome chr9
Human SNP position 16288426
Pig chromosome chr1
Pig SNP position 230239492
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1 in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region9p22.3
Chromosome idchr9
Chromosome position16288426
Reported geneIntergenic
Mapped geneC9orf92 - LOC107987050
Upstream gene id100129385
Downstream gene id107987050
SNP gene ids
Upstream gene distance12113
Downstream gene distance100314
SNP risk allelers7875024-A
SNPsrs7875024
Merged0
SNP id current7875024
Contextintergenic_variant
Intergenic1
Allele frequency0.663
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.044
%95 CiNR unit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST003263