SNP Detail For rs7868992
1.Mapping Information
Human SNP ID rs7868992
Human chromosome chr9
Human SNP position 114228791
Pig chromosome chr1
Pig SNP position 286036101
2.Annotation Information
PubMed ID22889924
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22889924
StudyGenome-wide association study of Tourette__s syndrome.
Disease/TraitTourette syndrome
Initial sample778 European ancestry cases, 4,414 European ancestry controls, 242 Ashkenazi Jewish cases, 354 Ashkenazi Jewish controls, 265 French Canadian founder cases, 196 French Canadian founder controls
Replication sample211 Latin American cases, 285 Latin American controls
Region9q32
Chromosome idchr9
Chromosome position114228791
Reported geneKIF12, ORM1, COL27A1
Mapped geneCOL27A1
Upstream gene id
Downstream gene id
SNP gene ids85301
Upstream gene distance
Downstream gene distance
SNP risk allelers7868992-G
SNPsrs7868992
Merged0
SNP id current7868992
Contextintron_variant
Intergenic0
Allele frequency0.28
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta1.29
%95 Ci[NR]
PlatformIllumina [484295]
CNVN
Mapped traitTourette syndrome
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004895
Study accessionGCST001635