SNP Detail For rs786870
1.Mapping Information
Human SNP ID rs786870
Human chromosome chr10
Human SNP position 26485765
Pig chromosome chr10
Pig SNP position 54360385
2.Annotation Information
PubMed ID22228203
JournalPharmacogenet Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/22228203
StudyA genome-wide association study of inflammatory biomarker changes in response to fenofibrate treatment in the Genetics of Lipid Lowering Drug and Diet Network.
Disease/TraitInflammatory biomarkers
Initial sample1,092 European ancestry individuals
Replication sampleNA
Region10p12.1
Chromosome idchr10
Chromosome position26485765
Reported geneAPBB1IP
Mapped geneAPBB1IP
Upstream gene id
Downstream gene id
SNP gene ids54518
Upstream gene distance
Downstream gene distance
SNP risk allelers786870-?
SNPsrs786870
Merged0
SNP id current786870
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000005
Pvalue mlog6.30102999566398
P value text(MCP1-TNF-a pattern prefenofibrate)
Or beta
%95 Ci
PlatformAffymetrix [2543887] (imputed)
CNVN
Mapped traitresponse to fenofibrate
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_1901557
Study accessionGCST001371