SNP Detail For rs78647349
1.Mapping Information
Human SNP ID rs78647349
Human chromosome chr4
Human SNP position 5235426
Pig chromosome chr8
Pig SNP position 4898864
2.Annotation Information
PubMed ID23535033
JournalAlzheimers Dement
Linkwww.ncbi.nlm.nih.gov/pubmed/23535033
StudyGenome-wide association study of the rate of cognitive decline in Alzheimer__s disease.
Disease/TraitAlzheimer__s disease (cognitive decline)
Initial sample303 European ancestry cases
Replication sample
Region4p16.2
Chromosome idchr4
Chromosome position5235426
Reported geneSTK32B
Mapped geneSTK32B
Upstream gene id
Downstream gene id
SNP gene ids55351
Upstream gene distance
Downstream gene distance
SNP risk allelers78647349-?
SNPsrs78647349
Merged0
SNP id current78647349
Contextintron_variant
Intergenic0
Allele frequency0.04
P value0.0000005
Pvalue mlog6.30102999566398
P value text
Or beta0.3
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001915