SNP Detail For rs7864648
1.Mapping Information
Human SNP ID rs7864648
Human chromosome chr9
Human SNP position 16368734
Pig chromosome chr1
Pig SNP position 230165553
2.Annotation Information
PubMed ID20881960
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/20881960
StudyHundreds of variants clustered in genomic loci and biological pathways affect human height.
Disease/TraitHeight
Initial sample133,653 European ancestry individuals
Replication sample50,074 European ancestry individuals
Region9p22.3
Chromosome idchr9
Chromosome position16368734
Reported geneBNC2
Mapped geneC9orf92 - BNC2
Upstream gene id100129385
Downstream gene id54796
SNP gene ids
Upstream gene distance92421
Downstream gene distance40769
SNP risk allelers7864648-T
SNPsrs7864648
Merged0
SNP id current7864648
Contextregulatory_region_variant
Intergenic1
Allele frequency0.32
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta0.022
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina [2834208] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000817