SNP Detail For rs7857709
1.Mapping Information
Human SNP ID rs7857709
Human chromosome chr9
Human SNP position 31394027
Pig chromosome chr10
Pig SNP position 39147483
2.Annotation Information
PubMed ID26105758
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/26105758
StudyA genome-wide association study identifies multiple loci for variation in human ear morphology.
Disease/TraitLobe size
Initial sample4,919 Latin American individuals
Replication sampleNA
Region9p21.1
Chromosome idchr9
Chromosome position31394027
Reported geneNR
Mapped geneLINC01243 - LOC105376010
Upstream gene id101929620
Downstream gene id105376010
SNP gene ids
Upstream gene distance12537
Downstream gene distance184591
SNP risk allelers7857709-?
SNPsrs7857709
Merged
SNP id current7857709
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000008
Pvalue mlog6.09691001300805
P value text(FDR adjusted)
Or beta
%95 Ci
PlatformIllumina [671038]
CNVN
Mapped traitlobe size
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007666
Study accessionGCST002999