SNP Detail For rs7856675
1.Mapping Information
Human SNP ID rs7856675
Human chromosome chr9
Human SNP position 4555305
Pig chromosome chr1
Pig SNP position 243260368
2.Annotation Information
PubMed ID23870195
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23870195
StudyGenetics of coronary artery calcification among African Americans, a meta-analysis.
Disease/TraitCoronary artery calcification
Initial sample5,823 African American individuals
Replication sample9,992 European ancestry individuals
Region9p24.2
Chromosome idchr9
Chromosome position4555305
Reported geneSLC1A1
Mapped geneSLC1A1
Upstream gene id
Downstream gene id
SNP gene ids6505
Upstream gene distance
Downstream gene distance
SNP risk allelers7856675-A
SNPsrs7856675
Merged0
SNP id current7856675
Contextintron_variant
Intergenic0
Allele frequency0.82
P value0.000008
Pvalue mlog5.09691001300805
P value text(AA)
Or beta0.22
%95 Ci[0.12-0.32] unit increase
PlatformAffymetrix, Illumina [up to 2727966] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST002097