Human SNP ID | rs7843479 |
---|---|
Human chromosome | chr8 |
Human SNP position | 21963302 |
Pig chromosome | chr14 |
Pig SNP position | 6678459 |
PubMed ID | 20139978 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20139978 |
Study | Genome-wide association study of hematological and biochemical traits in a Japanese population. |
Disease/Trait | Mean corpuscular volume |
Initial sample | 14,364 Japanese ancestry individuals |
Replication sample | NA |
Region | 8p21.3 |
Chromosome id | chr8 |
Chromosome position | 21963302 |
Reported gene | DOK2, XPO7 |
Mapped gene | XPO7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23039 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7843479-A |
SNPs | rs7843479 |
Merged | 0 |
SNP id current | 7843479 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.29 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 0.072 |
%95 Ci | [0.047-0.097] unit increase |
Platform | Illumina [561583] |
CNV | N |
Mapped trait | mean corpuscular volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004526 |
Study accession | GCST000585 |