Human SNP ID | rs7834765 |
---|---|
Human chromosome | chr8 |
Human SNP position | 121263666 |
Pig chromosome | chr4 |
Pig SNP position | 18919440 |
PubMed ID | 24925725 |
---|---|
Journal | J Am Soc Nephrol |
Link | www.ncbi.nlm.nih.gov/pubmed/24925725 |
Study | Lupus nephritis susceptibility Loci in women with systemic lupus erythematosus. |
Disease/Trait | Lupus nephritis in systemic lupus erythematosus |
Initial sample | 588 European ancestry cases, 1,412 European ancestry controls |
Replication sample | NA |
Region | 8q24.12 |
Chromosome id | chr8 |
Chromosome position | 121263666 |
Reported gene | intergenic |
Mapped gene | LOC105375731 - RPL35AP19 |
Upstream gene id | 105375731 |
Downstream gene id | 100271322 |
SNP gene ids | |
Upstream gene distance | 101341 |
Downstream gene distance | 116427 |
SNP risk allele | rs7834765-T |
SNPs | rs7834765 |
Merged | 0 |
SNP id current | 7834765 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (Recessive) |
Or beta | 3.15 |
%95 Ci | [1.97-5.03] |
Platform | Affymetrix, Illumina [1621689] (imputed) |
CNV | N |
Mapped trait | systemic lupus erythematosus, lupus nephritis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002690, http://www.ebi.ac.uk/efo/EFO_0005761 |
Study accession | GCST002479 |