SNP Detail For rs783396
1.Mapping Information
Human SNP ID rs783396
Human chromosome chr6
Human SNP position 106539495
Pig chromosome chr1
Pig SNP position 82029850
2.Annotation Information
PubMed ID17434096
JournalLancet Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/17434096
StudyA genome-wide genotyping study in patients with ischaemic stroke: initial analysis and data release.
Disease/TraitStroke
Initial sample259 European ancestry cases, 269 European ancestry controls
Replication sampleNA
Region6q21
Chromosome idchr6
Chromosome position106539495
Reported geneAIM1
Mapped geneAIM1
Upstream gene id
Downstream gene id
SNP gene ids202
Upstream gene distance
Downstream gene distance
SNP risk allelers783396-?
SNPsrs783396
Merged0
SNP id current783396
Contextmissense_variant
Intergenic0
Allele frequency0.9
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta2.17
%95 Ci[1.47-3.13]
PlatformIllumina [408803]
CNVN
Mapped traitstroke
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000712
Study accessionGCST000032