SNP Detail For rs7833268
1.Mapping Information
Human SNP ID rs7833268
Human chromosome chr8
Human SNP position 23961174
Pig chromosome chr14
Pig SNP position 8928797
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitSubcutaneous adipose tissue
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region8p21.2
Chromosome idchr8
Chromosome position23961174
Reported geneSTC1
Mapped geneSTC1 - LOC105379328
Upstream gene id6781
Downstream gene id105379328
SNP gene ids
Upstream gene distance106367
Downstream gene distance128926
SNP risk allelers7833268-C
SNPsrs7833268
Merged0
SNP id current7833268
Contextintergenic_variant
Intergenic1
Allele frequency0.13
P value0.0000006
Pvalue mlog6.22184874961635
P value text(women)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitsubcutaneous adipose tissue measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004766
Study accessionGCST001521