Human SNP ID | rs7833268 |
---|---|
Human chromosome | chr8 |
Human SNP position | 23961174 |
Pig chromosome | chr14 |
Pig SNP position | 8928797 |
PubMed ID | 22589738 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22589738 |
Study | Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. |
Disease/Trait | Subcutaneous adipose tissue |
Initial sample | 5,560 European ancestry female individuals, 4,997 European ancestry male individuals |
Replication sample | NA |
Region | 8p21.2 |
Chromosome id | chr8 |
Chromosome position | 23961174 |
Reported gene | STC1 |
Mapped gene | STC1 - LOC105379328 |
Upstream gene id | 6781 |
Downstream gene id | 105379328 |
SNP gene ids | |
Upstream gene distance | 106367 |
Downstream gene distance | 128926 |
SNP risk allele | rs7833268-C |
SNPs | rs7833268 |
Merged | 0 |
SNP id current | 7833268 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.13 |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | (women) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [2500000] (imputed) |
CNV | N |
Mapped trait | subcutaneous adipose tissue measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004766 |
Study accession | GCST001521 |