SNP Detail For rs7832232
1.Mapping Information
Human SNP ID rs7832232
Human chromosome chr8
Human SNP position 38611785
Pig chromosome chr15
Pig SNP position 54886241
2.Annotation Information
PubMed ID20686608
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/20686608
StudyGenome-wide association study of pancreatic cancer in Japanese population.
Disease/TraitPancreatic cancer
Initial sample991 Japanese ancestry cases, 5,209 Japanese ancestry controls
Replication sampleNA
Region8p11.22
Chromosome idchr8
Chromosome position38611785
Reported geneRNF5P1
Mapped geneRNF5P1 - TACC1
Upstream gene id286140
Downstream gene id6867
SNP gene ids
Upstream gene distance10528
Downstream gene distance116401
SNP risk allelers7832232-A
SNPsrs7832232
Merged0
SNP id current7832232
Contextintergenic_variant
Intergenic1
Allele frequency0.45
P value0.000005
Pvalue mlog5.30102999566398
P value text(recessive)
Or beta1.45
%95 Ci[1.24-1.71]
PlatformIllumina [420236]
CNVN
Mapped traitpancreatic carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002618
Study accessionGCST000745