Human SNP ID | rs7828089 |
---|---|
Human chromosome | chr8 |
Human SNP position | 22406821 |
Pig chromosome | chr14 |
Pig SNP position | 7105021 |
PubMed ID | 25648963 |
---|---|
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25648963 |
Study | Genome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium. |
Disease/Trait | Verbal declarative memory |
Initial sample | Up to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals |
Replication sample | Up to 10,617 European ancestry individuals, up to 3,811 African American individuals |
Region | 8p21.3 |
Chromosome id | chr8 |
Chromosome position | 22406821 |
Reported gene | SLC39A14, PPP3CC |
Mapped gene | SLC39A14 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23516 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7828089-G |
SNPs | rs7828089 |
Merged | 0 |
SNP id current | 7828089 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.48 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (ALL-dr, EA) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | word list delayed recall measurement, memory performance, paragraph delayed recall measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006805, http://www.ebi.ac.uk/efo/EFO_0004874, http://www.ebi.ac.uk/efo/EFO_0006806 |
Study accession | GCST002701 |
PubMed ID | 25648963 |
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25648963 |
Study | Genome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium. |
Disease/Trait | Verbal declarative memory |
Initial sample | Up to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals |
Replication sample | Up to 10,617 European ancestry individuals, up to 3,811 African American individuals |
Region | 8p21.3 |
Chromosome id | chr8 |
Chromosome position | 22406821 |
Reported gene | SLC39A14, PPP3CC |
Mapped gene | SLC39A14 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23516 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7828089-G |
SNPs | rs7828089 |
Merged | 0 |
SNP id current | 7828089 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.48 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (ALL-dr) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | word list delayed recall measurement, memory performance, paragraph delayed recall measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006805, http://www.ebi.ac.uk/efo/EFO_0004874, http://www.ebi.ac.uk/efo/EFO_0006806 |
Study accession | GCST002701 |