SNP Detail For rs7827290
1.Mapping Information
Human SNP ID rs7827290
Human chromosome chr8
Human SNP position 141290216
Pig chromosome chr4
Pig SNP position 1969097
2.Annotation Information
PubMed ID21926972
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21926972
StudyLarge-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4.
Disease/TraitBipolar disorder
Initial sample7,481 European ancestry cases, 9,250 European ancestry controls
Replication sample4,496 European ancestry cases, 42,422 European ancestry controls
Region8q24.3
Chromosome idchr8
Chromosome position141290216
Reported geneLOC731779, GPR20
Mapped geneSLC45A4, LOC105375786
Upstream gene id
Downstream gene id
SNP gene ids57210, 105375786
Upstream gene distance
Downstream gene distance
SNP risk allelers7827290-G
SNPsrs7827290
Merged0
SNP id current7827290
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta1.1
%95 Ci[NR]
PlatformAffymetrix, Illumina [2415422] (imputed)
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST001241