SNP Detail For rs78226650
1.Mapping Information
Human SNP ID rs78226650
Human chromosome chr2
Human SNP position 58925919
Pig chromosome chr3
Pig SNP position 86955345
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region2p16.1
Chromosome idchr2
Chromosome position58925919
Reported geneNR
Mapped geneLINC01122
Upstream gene id
Downstream gene id
SNP gene ids400955
Upstream gene distance
Downstream gene distance
SNP risk allelers78226650-A
SNPsrs78226650
Merged
SNP id current78226650
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.13
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048