Human SNP ID | rs78192384 |
---|---|
Human chromosome | chr18 |
Human SNP position | 3041399 |
Pig chromosome | chr6 |
Pig SNP position | 96646636 |
PubMed ID | 24159190 |
---|---|
Journal | Eur Heart J |
Link | www.ncbi.nlm.nih.gov/pubmed/24159190 |
Study | Genome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality. |
Disease/Trait | Symmetrical dimethylarginine levels |
Initial sample | 5110 European ancestry individuals |
Replication sample | NA |
Region | 18p11.31 |
Chromosome id | chr18 |
Chromosome position | 3041399 |
Reported gene | NR |
Mapped gene | LPIN2 - MYOM1 |
Upstream gene id | 9663 |
Downstream gene id | 8736 |
SNP gene ids | |
Upstream gene distance | 28084 |
Downstream gene distance | 25408 |
SNP risk allele | rs78192384-A |
SNPs | rs78192384 |
Merged | 0 |
SNP id current | 78192384 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.03 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 0.27 |
%95 Ci | [0.15-0.39] unit decrease |
Platform | Affymetrix, Illumina [10085758] (imputed) |
CNV | N |
Mapped trait | serum dimethylarginine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005418 |
Study accession | GCST002239 |