SNP Detail For rs781856
1.Mapping Information
Human SNP ID rs781856
Human chromosome chr17
Human SNP position 4046930
Pig chromosome chr12
Pig SNP position 52078865
2.Annotation Information
PubMed ID25524916
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25524916
StudyGenetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium.
Disease/TraitGlucose homeostasis traits
Initial sampleup to 4,176 Mexican American individuals
Replication sampleNA
Region17p13.2
Chromosome idchr17
Chromosome position4046930
Reported geneZZEF1
Mapped geneZZEF1
Upstream gene id
Downstream gene id
SNP gene ids23140
Upstream gene distance
Downstream gene distance
SNP risk allelers781856-?
SNPsrs781856
Merged0
SNP id current781856
Contextintron_variant
Intergenic0
Allele frequency
P value0.000007
Pvalue mlog5.15490195998574
P value text(MCRI)
Or beta0.94
%95 Ci[0.45-1.43] unit increase
PlatformIllumina [693128]
CNVN
Mapped traitinsulin metabolic clearance rate measurement, glucose homeostasis measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006830, http://www.ebi.ac.uk/efo/EFO_0006896
Study accessionGCST002726