Human SNP ID | rs780179 |
---|---|
Human chromosome | chr5 |
Human SNP position | 22812155 |
Pig chromosome | chr16 |
Pig SNP position | 11894499 |
PubMed ID | 23502783 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23502783 |
Study | The CCND1 c.870G>A polymorphism is a risk factor for t(11;14)(q13;q32) multiple myeloma. |
Disease/Trait | Multiple myeloma (IgH translocation) |
Initial sample | up to 1,660 European ancestry cases, 7,306 European ancestry controls |
Replication sample | |
Region | 5p14.3 |
Chromosome id | chr5 |
Chromosome position | 22812155 |
Reported gene | NR |
Mapped gene | CDH12 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1010 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs780179-G |
SNPs | rs780179 |
Merged | 0 |
SNP id current | 780179 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.48 |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | (t11;14 vs non t11;14) |
Or beta | 1.59 |
%95 Ci | [1.32-1.92] |
Platform | Illumina [414804] (imputed) |
CNV | N |
Mapped trait | multiple myeloma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001378 |
Study accession | GCST001906 |