Human SNP ID | rs78015633 |
---|---|
Human chromosome | chr11 |
Human SNP position | 40855036 |
Pig chromosome | chr2 |
Pig SNP position | 22904177 |
PubMed ID | 24324551 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24324551 |
Study | Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects. |
Disease/Trait | PR interval in Tripanosoma cruzi seropositivity |
Initial sample | 580 Brazilian ancestry individuals |
Replication sample | NA |
Region | 11p12 |
Chromosome id | chr11 |
Chromosome position | 40855036 |
Reported gene | NR |
Mapped gene | LRRC4C |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57689 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs78015633-? |
SNPs | rs78015633 |
Merged | 0 |
SNP id current | 78015633 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [5486770] (imputed) |
CNV | N |
Mapped trait | PR interval, Trypanosoma cruzi seropositivity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004462, http://www.ebi.ac.uk/efo/EFO_0005530 |
Study accession | GCST002279 |