SNP Detail For rs78015633
1.Mapping Information
Human SNP ID rs78015633
Human chromosome chr11
Human SNP position 40855036
Pig chromosome chr2
Pig SNP position 22904177
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitPR interval in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region11p12
Chromosome idchr11
Chromosome position40855036
Reported geneNR
Mapped geneLRRC4C
Upstream gene id
Downstream gene id
SNP gene ids57689
Upstream gene distance
Downstream gene distance
SNP risk allelers78015633-?
SNPsrs78015633
Merged0
SNP id current78015633
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitPR interval, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004462, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002279