Human SNP ID | rs7789940 |
---|---|
Human chromosome | chr7 |
Human SNP position | 76321913 |
Pig chromosome | chr3 |
Pig SNP position | 9914260 |
PubMed ID | 21654844 |
---|---|
Journal | Genes Immun |
Link | www.ncbi.nlm.nih.gov/pubmed/21654844 |
Study | Genome-wide association study of severity in multiple sclerosis. |
Disease/Trait | Multiple sclerosis |
Initial sample | 1,470 European ancestry cases |
Replication sample | NA |
Region | 7q11.23 |
Chromosome id | chr7 |
Chromosome position | 76321913 |
Reported gene | LOC100289506 |
Mapped gene | HSPB1 - YWHAG |
Upstream gene id | 3315 |
Downstream gene id | 7532 |
SNP gene ids | |
Upstream gene distance | 17616 |
Downstream gene distance | 4878 |
SNP risk allele | rs7789940-G |
SNPs | rs7789940 |
Merged | 0 |
SNP id current | 7789940 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.19 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Extreme) |
Or beta | 1.87 |
%95 Ci | [NR] |
Platform | Affymetrix [2110417] (imputed) |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST001096 |