Human SNP ID | rs7789850 |
---|---|
Human chromosome | chr7 |
Human SNP position | 141600811 |
Pig chromosome | chr18 |
Pig SNP position | 8656159 |
PubMed ID | 25897833 |
---|---|
Journal | Transl Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25897833 |
Study | Genome-wide association study of behavioural and psychiatric features in human prion disease. |
Disease/Trait | Mood disorder and prion disease |
Initial sample | Up to 170 cases, 5,200 controls |
Replication sample | NA |
Region | 7q34 |
Chromosome id | chr7 |
Chromosome position | 141600811 |
Reported gene | AGK |
Mapped gene | AGK |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55750 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7789850-? |
SNPs | rs7789850 |
Merged | 0 |
SNP id current | 7789850 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.026 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 4.6 |
%95 Ci | [2.70鈥?.83] |
Platform | Illumina [518938] |
CNV | N |
Mapped trait | prion disease, mood disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004720, http://www.ebi.ac.uk/efo/EFO_0004247 |
Study accession | GCST002862 |