SNP Detail For rs7789850
1.Mapping Information
Human SNP ID rs7789850
Human chromosome chr7
Human SNP position 141600811
Pig chromosome chr18
Pig SNP position 8656159
2.Annotation Information
PubMed ID25897833
JournalTransl Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25897833
StudyGenome-wide association study of behavioural and psychiatric features in human prion disease.
Disease/TraitMood disorder and prion disease
Initial sampleUp to 170 cases, 5,200 controls
Replication sampleNA
Region7q34
Chromosome idchr7
Chromosome position141600811
Reported geneAGK
Mapped geneAGK
Upstream gene id
Downstream gene id
SNP gene ids55750
Upstream gene distance
Downstream gene distance
SNP risk allelers7789850-?
SNPsrs7789850
Merged0
SNP id current7789850
Contextintron_variant
Intergenic0
Allele frequency0.026
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta4.6
%95 Ci[2.70鈥?.83]
PlatformIllumina [518938]
CNVN
Mapped traitprion disease, mood disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004720, http://www.ebi.ac.uk/efo/EFO_0004247
Study accessionGCST002862