SNP Detail For rs77868089
1.Mapping Information
Human SNP ID rs77868089
Human chromosome chr13
Human SNP position 39822000
Pig chromosome chr11
Pig SNP position 14943994
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region13q14.11
Chromosome idchr13
Chromosome position39822000
Reported geneNR
Mapped geneCOG6 - LOC105370171
Upstream gene id57511
Downstream gene id105370171
SNP gene ids
Upstream gene distance30335
Downstream gene distance241569
SNP risk allelers77868089-A
SNPsrs77868089
Merged
SNP id current77868089
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.19
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048