Human SNP ID | rs7773456 |
---|---|
Human chromosome | chr6 |
Human SNP position | 19823007 |
Pig chromosome | chr7 |
Pig SNP position | 16165040 |
PubMed ID | 24925725 |
---|---|
Journal | J Am Soc Nephrol |
Link | www.ncbi.nlm.nih.gov/pubmed/24925725 |
Study | Lupus nephritis susceptibility Loci in women with systemic lupus erythematosus. |
Disease/Trait | Lupus nephritis in systemic lupus erythematosus |
Initial sample | 588 European ancestry cases, 1,412 European ancestry controls |
Replication sample | NA |
Region | 6p22.3 |
Chromosome id | chr6 |
Chromosome position | 19823007 |
Reported gene | intergenic |
Mapped gene | LOC105374963 - ID4 |
Upstream gene id | 105374963 |
Downstream gene id | 3400 |
SNP gene ids | |
Upstream gene distance | 8832 |
Downstream gene distance | 14363 |
SNP risk allele | rs7773456-? |
SNPs | rs7773456 |
Merged | 0 |
SNP id current | 7773456 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | (Dominant) |
Or beta | 1.7544 |
%95 Ci | [1.43-2.17] |
Platform | Affymetrix, Illumina [1621689] (imputed) |
CNV | N |
Mapped trait | systemic lupus erythematosus, lupus nephritis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002690, http://www.ebi.ac.uk/efo/EFO_0005761 |
Study accession | GCST002479 |