SNP Detail For rs7773456
1.Mapping Information
Human SNP ID rs7773456
Human chromosome chr6
Human SNP position 19823007
Pig chromosome chr7
Pig SNP position 16165040
2.Annotation Information
PubMed ID24925725
JournalJ Am Soc Nephrol
Linkwww.ncbi.nlm.nih.gov/pubmed/24925725
StudyLupus nephritis susceptibility Loci in women with systemic lupus erythematosus.
Disease/TraitLupus nephritis in systemic lupus erythematosus
Initial sample588 European ancestry cases, 1,412 European ancestry controls
Replication sampleNA
Region6p22.3
Chromosome idchr6
Chromosome position19823007
Reported geneintergenic
Mapped geneLOC105374963 - ID4
Upstream gene id105374963
Downstream gene id3400
SNP gene ids
Upstream gene distance8832
Downstream gene distance14363
SNP risk allelers7773456-?
SNPsrs7773456
Merged0
SNP id current7773456
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.0000007
Pvalue mlog6.15490195998574
P value text(Dominant)
Or beta1.7544
%95 Ci[1.43-2.17]
PlatformAffymetrix, Illumina [1621689] (imputed)
CNVN
Mapped traitsystemic lupus erythematosus, lupus nephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002690, http://www.ebi.ac.uk/efo/EFO_0005761
Study accessionGCST002479