SNP Detail For rs7769051
1.Mapping Information
Human SNP ID rs7769051
Human chromosome chr6
Human SNP position 132825657
Pig chromosome chr1
Pig SNP position 34431327
2.Annotation Information
PubMed ID21150874
JournalKidney Int
Linkwww.ncbi.nlm.nih.gov/pubmed/21150874
StudyA genome-wide association study for diabetic nephropathy genes in African Americans.
Disease/TraitType 2 diabetes nephropathy
Initial sample965 African American cases, 1,029 African American controls
Replication sample709 African American cases, 690 African American controls
Region6q23.2
Chromosome idchr6
Chromosome position132825657
Reported geneRPS12
Mapped geneRPS12 - LOC105378007
Upstream gene id6206
Downstream gene id105378007
SNP gene ids
Upstream gene distance8093
Downstream gene distance50975
SNP risk allelers7769051-A
SNPsrs7769051
Merged0
SNP id current7769051
Contextintergenic_variant
Intergenic1
Allele frequency0.29
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.28
%95 Ci[1.16-1.42]
PlatformAffymetrix [832357]
CNVN
Mapped traitdiabetic nephropathy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000401
Study accessionGCST000909