Human SNP ID | rs7769051 |
---|---|
Human chromosome | chr6 |
Human SNP position | 132825657 |
Pig chromosome | chr1 |
Pig SNP position | 34431327 |
PubMed ID | 21150874 |
---|---|
Journal | Kidney Int |
Link | www.ncbi.nlm.nih.gov/pubmed/21150874 |
Study | A genome-wide association study for diabetic nephropathy genes in African Americans. |
Disease/Trait | Type 2 diabetes nephropathy |
Initial sample | 965 African American cases, 1,029 African American controls |
Replication sample | 709 African American cases, 690 African American controls |
Region | 6q23.2 |
Chromosome id | chr6 |
Chromosome position | 132825657 |
Reported gene | RPS12 |
Mapped gene | RPS12 - LOC105378007 |
Upstream gene id | 6206 |
Downstream gene id | 105378007 |
SNP gene ids | |
Upstream gene distance | 8093 |
Downstream gene distance | 50975 |
SNP risk allele | rs7769051-A |
SNPs | rs7769051 |
Merged | 0 |
SNP id current | 7769051 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.29 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.28 |
%95 Ci | [1.16-1.42] |
Platform | Affymetrix [832357] |
CNV | N |
Mapped trait | diabetic nephropathy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000401 |
Study accession | GCST000909 |