SNP Detail For rs7765828
1.Mapping Information
Human SNP ID rs7765828
Human chromosome chr6
Human SNP position 16294491
Pig chromosome chr7
Pig SNP position 12892624
2.Annotation Information
PubMed ID24952745
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24952745
StudyGenetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization.
Disease/TraitQT interval
Initial sampleUp to 70,389 European ancestry individuals, up to 672 Orcadian individuals
Replication sampleUp to 33,316 European ancestry individuals
Region6p22.3
Chromosome idchr6
Chromosome position16294491
Reported geneGMPR
Mapped geneGMPR
Upstream gene id
Downstream gene id
SNP gene ids2766
Upstream gene distance
Downstream gene distance
SNP risk allelers7765828-G
SNPsrs7765828
Merged0
SNP id current7765828
Contextintron_variant
Intergenic0
Allele frequency0.402
P value0.0000000003
Pvalue mlog9.52287874528033
P value text
Or beta0.55
%95 Ci[0.37-0.73] unit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST002500