SNP Detail For rs77640143
1.Mapping Information
Human SNP ID rs77640143
Human chromosome chr2
Human SNP position 188922101
Pig chromosome chr15
Pig SNP position 104027328
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region2q32.2
Chromosome idchr2
Chromosome position188922101
Reported geneIntergenic
Mapped geneDIRC1 - LOC105373791
Upstream gene id116093
Downstream gene id105373791
SNP gene ids
Upstream gene distance131997
Downstream gene distance44357
SNP risk allelers77640143-T
SNPsrs77640143
Merged0
SNP id current77640143
Contextintergenic_variant
Intergenic1
Allele frequency0.993
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.057
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264