Human SNP ID | rs7763064 |
---|---|
Human chromosome | chr6 |
Human SNP position | 142476152 |
Pig chromosome | chr1 |
Pig SNP position | 25066136 |
PubMed ID | 20881960 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20881960 |
Study | Hundreds of variants clustered in genomic loci and biological pathways affect human height. |
Disease/Trait | Height |
Initial sample | 133,653 European ancestry individuals |
Replication sample | 50,074 European ancestry individuals |
Region | 6q24.2 |
Chromosome id | chr6 |
Chromosome position | 142476152 |
Reported gene | GPR126 |
Mapped gene | ADGRG6 - LOC153910 |
Upstream gene id | 57211 |
Downstream gene id | 153910 |
SNP gene ids | |
Upstream gene distance | 29886 |
Downstream gene distance | 50303 |
SNP risk allele | rs7763064-A |
SNPs | rs7763064 |
Merged | 0 |
SNP id current | 7763064 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.29 |
P value | 1E-33 |
Pvalue mlog | 33 |
P value text | |
Or beta | 0.048 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix, Illumina [2834208] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000817 |
PubMed ID | 25281659 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25281659 |
Study | A novel common variant in DCST2 is associated with length in early life and height in adulthood. |
Disease/Trait | Birth length |
Initial sample | 28,459 European ancestry individuals |
Replication sample | 16,145 European ancestry individuals, 280 Moroccan ancestry individuals, 284 Surinamese ancestry individuals, 319 Turkish ancestry individuals, 651 Chinese ancestry individuals |
Region | 6q24.2 |
Chromosome id | chr6 |
Chromosome position | 142476152 |
Reported gene | GPR126 |
Mapped gene | ADGRG6 - LOC153910 |
Upstream gene id | 57211 |
Downstream gene id | 153910 |
SNP gene ids | |
Upstream gene distance | 29886 |
Downstream gene distance | 50303 |
SNP risk allele | rs7763064-A |
SNPs | rs7763064 |
Merged | 0 |
SNP id current | 7763064 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.288 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.044 |
%95 Ci | [0.024-0.064] unit decrease |
Platform | Affymetrix, Illumina [2201971] (imputed) |
CNV | N |
Mapped trait | body height at birth |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006784 |
Study accession | GCST002644 |