Human SNP ID | rs7762246 |
---|---|
Human chromosome | chr6 |
Human SNP position | 51234458 |
Pig chromosome | chr7 |
Pig SNP position | 51577010 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 6p12.3 |
Chromosome id | chr6 |
Chromosome position | 51234458 |
Reported gene | LOC646517 |
Mapped gene | FTH1P5 - LOC105375085 |
Upstream gene id | 2509 |
Downstream gene id | 105375085 |
SNP gene ids | |
Upstream gene distance | 320996 |
Downstream gene distance | 163863 |
SNP risk allele | rs7762246-G |
SNPs | rs7762246 |
Merged | 0 |
SNP id current | 7762246 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.11 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Vigorous activity ) |
Or beta | 0.03 |
%95 Ci | [NR] min/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | physical activity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003940 |
Study accession | GCST001762 |