SNP Detail For rs7762246
1.Mapping Information
Human SNP ID rs7762246
Human chromosome chr6
Human SNP position 51234458
Pig chromosome chr7
Pig SNP position 51577010
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region6p12.3
Chromosome idchr6
Chromosome position51234458
Reported geneLOC646517
Mapped geneFTH1P5 - LOC105375085
Upstream gene id2509
Downstream gene id105375085
SNP gene ids
Upstream gene distance320996
Downstream gene distance163863
SNP risk allelers7762246-G
SNPsrs7762246
Merged0
SNP id current7762246
Contextintergenic_variant
Intergenic1
Allele frequency0.11
P value0.000006
Pvalue mlog5.22184874961635
P value text(Vigorous activity )
Or beta0.03
%95 Ci[NR] min/d increase
PlatformIllumina [899892]
CNVN
Mapped traitphysical activity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003940
Study accessionGCST001762