Human SNP ID | rs77569859 |
---|---|
Human chromosome | chr2 |
Human SNP position | 31188421 |
Pig chromosome | chr3 |
Pig SNP position | 114904479 |
PubMed ID | 25017104 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25017104 |
Study | Genome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease. |
Disease/Trait | Eosinophilic esophagitis |
Initial sample | 657 European ancestry cases, 9,296 European ancestry controls |
Replication sample | NA |
Region | 2p23.1 |
Chromosome id | chr2 |
Chromosome position | 31188421 |
Reported gene | CAPN14 |
Mapped gene | CAPN14 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 440854 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs77569859-G |
SNPs | rs77569859 |
Merged | 0 |
SNP id current | 77569859 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.05 |
P value | 0.0000000003 |
Pvalue mlog | 9.52287874528033 |
P value text | |
Or beta | 1.98 |
%95 Ci | [NR] |
Platform | Illumina [1468075] |
CNV | N |
Mapped trait | eosinophilic esophagitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004232 |
Study accession | GCST002527 |