SNP Detail For rs77569859
1.Mapping Information
Human SNP ID rs77569859
Human chromosome chr2
Human SNP position 31188421
Pig chromosome chr3
Pig SNP position 114904479
2.Annotation Information
PubMed ID25017104
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25017104
StudyGenome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease.
Disease/TraitEosinophilic esophagitis
Initial sample657 European ancestry cases, 9,296 European ancestry controls
Replication sampleNA
Region2p23.1
Chromosome idchr2
Chromosome position31188421
Reported geneCAPN14
Mapped geneCAPN14
Upstream gene id
Downstream gene id
SNP gene ids440854
Upstream gene distance
Downstream gene distance
SNP risk allelers77569859-G
SNPsrs77569859
Merged0
SNP id current77569859
Contextintron_variant
Intergenic0
Allele frequency0.05
P value0.0000000003
Pvalue mlog9.52287874528033
P value text
Or beta1.98
%95 Ci[NR]
PlatformIllumina [1468075]
CNVN
Mapped traiteosinophilic esophagitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004232
Study accessionGCST002527