Human SNP ID | rs7756935 |
---|---|
Human chromosome | chr6 |
Human SNP position | 46707288 |
Pig chromosome | chr7 |
Pig SNP position | 48152659 |
PubMed ID | 22003152 |
---|---|
Journal | Eur Heart J |
Link | www.ncbi.nlm.nih.gov/pubmed/22003152 |
Study | Eight genetic loci associated with variation in lipoprotein-associated phospholipase A2 mass and activity and coronary heart disease: meta-analysis of genome-wide association studies from five community-based studies. |
Disease/Trait | Lipoprotein-associated phospholipase A2 activity and mass |
Initial sample | 12,126 European ancestry individuals, 1,538 individuals |
Replication sample | NA |
Region | 6p12.3 |
Chromosome id | chr6 |
Chromosome position | 46707288 |
Reported gene | PLA2G7 |
Mapped gene | PLA2G7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7941 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7756935-A |
SNPs | rs7756935 |
Merged | 0 |
SNP id current | 7756935 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.81 |
P value | 0.0000000001 |
Pvalue mlog | 10 |
P value text | (Activity concentrations) |
Or beta | 0.027 |
%95 Ci | [0.019-0.035] unit decrease |
Platform | Affymetrix, Illumina [2661766] (imputed) |
CNV | N |
Mapped trait | lipoprotein-associated phospholipase A(2) measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004746 |
Study accession | GCST001273 |