SNP Detail For rs7750345
1.Mapping Information
Human SNP ID rs7750345
Human chromosome chr6
Human SNP position 105812253
Pig chromosome chr1
Pig SNP position 81424104
2.Annotation Information
PubMed ID23326517
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23326517
StudyInsights into the genetic architecture of early stage age-related macular degeneration: a genome-wide association study meta-analysis.
Disease/TraitAge-related macular degeneration
Initial sample3,772 European ancestry cases, 16,033 European ancestry controls
Replication sample264 Asian ancestry cases, 3,926 Asian ancestry controls
Region6q21
Chromosome idchr6
Chromosome position105812253
Reported geneintergenic
Mapped geneLOC105377923
Upstream gene id
Downstream gene id
SNP gene ids105377923
Upstream gene distance
Downstream gene distance
SNP risk allelers7750345-A
SNPsrs7750345
Merged0
SNP id current7750345
Contextintergenic_variant
Intergenic0
Allele frequency0.75
P value0.000007
Pvalue mlog5.15490195998574
P value text(EA)
Or beta1.16
%95 Ci[1.09-1.24]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitage-related macular degeneration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001365
Study accessionGCST001814