SNP Detail For rs77490194
1.Mapping Information
Human SNP ID rs77490194
Human chromosome chr6
Human SNP position 34085916
Pig chromosome chr7
Pig SNP position 34887902
2.Annotation Information
PubMed ID25574825
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25574825
StudyGenome-wide Comparative Analysis of Atopic Dermatitis and Psoriasis Gives Insight into Opposing Genetic Mechanisms.
Disease/TraitInflammatory skin disease
Initial sample2,079 European ancestry atopic dermatitis cases, 4,212 European ancestry psoriasis cases, 11,899 European ancestry controls
Replication sampleNA
Region6p21.31
Chromosome idchr6
Chromosome position34085916
Reported geneGRM4
Mapped geneGRM4
Upstream gene id
Downstream gene id
SNP gene ids2914
Upstream gene distance
Downstream gene distance
SNP risk allelers77490194-?
SNPsrs77490194
Merged0
SNP id current77490194
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text(Atopic dermatitis)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 5200000]
CNVN
Mapped traitatopic eczema
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000274
Study accessionGCST002740