SNP Detail For rs7748513
1.Mapping Information
Human SNP ID rs7748513
Human chromosome chr6
Human SNP position 41160234
Pig chromosome chr7
Pig SNP position 41764054
2.Annotation Information
PubMed ID22939635
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22939635
StudyGenome-wide association and population genetic analysis of C-reactive protein in African American and Hispanic American women.
Disease/TraitC-reactive protein
Initial sample8,280 African American female individuals, 3,548 Hispanic female individuals
Replication sample3,787 African American female individuals, 3,548 Hispanic female individuals, 5,656 European ancestry individuals
Region6p21.1
Chromosome idchr6
Chromosome position41160234
Reported geneTREM2
Mapped geneLOC105375056, TREM2
Upstream gene id
Downstream gene id
SNP gene ids105375056, 54209
Upstream gene distance
Downstream gene distance
SNP risk allelers7748513-G
SNPsrs7748513
Merged0
SNP id current7748513
Contextintron_variant
Intergenic0
Allele frequency0.432
P value0.0000000001
Pvalue mlog10
P value text(AA women)
Or beta
%95 Ci
PlatformAffymetrix [up to 2203609] (imputed)
CNVN
Mapped traitC-reactive protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004458
Study accessionGCST001650