Human SNP ID | rs7748513 |
---|---|
Human chromosome | chr6 |
Human SNP position | 41160234 |
Pig chromosome | chr7 |
Pig SNP position | 41764054 |
PubMed ID | 22939635 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22939635 |
Study | Genome-wide association and population genetic analysis of C-reactive protein in African American and Hispanic American women. |
Disease/Trait | C-reactive protein |
Initial sample | 8,280 African American female individuals, 3,548 Hispanic female individuals |
Replication sample | 3,787 African American female individuals, 3,548 Hispanic female individuals, 5,656 European ancestry individuals |
Region | 6p21.1 |
Chromosome id | chr6 |
Chromosome position | 41160234 |
Reported gene | TREM2 |
Mapped gene | LOC105375056, TREM2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105375056, 54209 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7748513-G |
SNPs | rs7748513 |
Merged | 0 |
SNP id current | 7748513 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.432 |
P value | 0.0000000001 |
Pvalue mlog | 10 |
P value text | (AA women) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [up to 2203609] (imputed) |
CNV | N |
Mapped trait | C-reactive protein measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004458 |
Study accession | GCST001650 |