SNP Detail For rs7747724
1.Mapping Information
Human SNP ID rs7747724
Human chromosome chr6
Human SNP position 20751084
Pig chromosome chr7
Pig SNP position 17003088
2.Annotation Information
PubMed ID24163127
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24163127
StudyGenome-wide association study identifies multiple loci associated with bladder cancer risk.
Disease/TraitBladder cancer
Initial sample6,911 European ancestry cases, 11,818 European ancestry controls
Replication sample801 cases, 1,307 controls
Region6p22.3
Chromosome idchr6
Chromosome position20751084
Reported geneNR
Mapped geneCDKAL1
Upstream gene id
Downstream gene id
SNP gene ids54901
Upstream gene distance
Downstream gene distance
SNP risk allelers7747724-?
SNPsrs7747724
Merged0
SNP id current7747724
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta1.11
%95 Ci[1.06-1.16]
PlatformIllumina [462190]
CNVN
Mapped traitbladder carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000292
Study accessionGCST002243