SNP Detail For rs7747216
1.Mapping Information
Human SNP ID rs7747216
Human chromosome chr6
Human SNP position 33508941
Pig chromosome chr7
Pig SNP position 34310328
2.Annotation Information
PubMed ID21685187
JournalThorax
Linkwww.ncbi.nlm.nih.gov/pubmed/21685187
StudyGenome-wide association study of smoking behaviours in patients with COPD.
Disease/TraitAge at smoking initiation in chronic obstructive pulmonary disease
Initial sample3,397 European ancestry cases
Replication sampleNA
Region6p21.31
Chromosome idchr6
Chromosome position33508941
Reported geneintergenic
Mapped geneZBTB9 - BAK1
Upstream gene id221504
Downstream gene id578
SNP gene ids
Upstream gene distance51397
Downstream gene distance63605
SNP risk allelers7747216-T
SNPsrs7747216
Merged0
SNP id current7747216
Contextregulatory_region_variant
Intergenic1
Allele frequency0.64
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta0.044
%95 Ciunit increase
PlatformIllumina [~ 6300000] (imputed)
CNVN
Mapped traitchronic obstructive pulmonary disease, smoking initiation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0005670
Study accessionGCST001113