SNP Detail For rs7742824
1.Mapping Information
Human SNP ID rs7742824
Human chromosome chr6
Human SNP position 44097574
Pig chromosome chr7
Pig SNP position 44923262
2.Annotation Information
PubMed ID23377640
JournalAm J Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23377640
StudyCommon genetic variation and antidepressant efficacy in major depressive disorder: a meta-analysis of three genome-wide pharmacogenetic studies.
Disease/TraitMajor depressive disorder
Initial sampleUp to 2,256 European ancestry cases
Replication sampleNA
Region6p21.1
Chromosome idchr6
Chromosome position44097574
Reported geneMRPL14
Mapped geneRPL29P16 - MRPL14
Upstream gene id100131206
Downstream gene id64928
SNP gene ids
Upstream gene distance7811
Downstream gene distance16061
SNP risk allelers7742824-A
SNPsrs7742824
Merged0
SNP id current7742824
Contextintergenic_variant
Intergenic1
Allele frequency0.224
P value0.000009
Pvalue mlog5.04575749056067
P value text(% improvement - 2 weeks)
Or beta1.185
%95 Ci[1.11-1.26]
PlatformAffymetrix, Illumina [1200000] (imputed)
CNVN
Mapped traitunipolar depression
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761
Study accessionGCST001850