Human SNP ID | rs7742824 |
---|---|
Human chromosome | chr6 |
Human SNP position | 44097574 |
Pig chromosome | chr7 |
Pig SNP position | 44923262 |
PubMed ID | 23377640 |
---|---|
Journal | Am J Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/23377640 |
Study | Common genetic variation and antidepressant efficacy in major depressive disorder: a meta-analysis of three genome-wide pharmacogenetic studies. |
Disease/Trait | Major depressive disorder |
Initial sample | Up to 2,256 European ancestry cases |
Replication sample | NA |
Region | 6p21.1 |
Chromosome id | chr6 |
Chromosome position | 44097574 |
Reported gene | MRPL14 |
Mapped gene | RPL29P16 - MRPL14 |
Upstream gene id | 100131206 |
Downstream gene id | 64928 |
SNP gene ids | |
Upstream gene distance | 7811 |
Downstream gene distance | 16061 |
SNP risk allele | rs7742824-A |
SNPs | rs7742824 |
Merged | 0 |
SNP id current | 7742824 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.224 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (% improvement - 2 weeks) |
Or beta | 1.185 |
%95 Ci | [1.11-1.26] |
Platform | Affymetrix, Illumina [1200000] (imputed) |
CNV | N |
Mapped trait | unipolar depression |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003761 |
Study accession | GCST001850 |