SNP Detail For rs7739264
1.Mapping Information
Human SNP ID rs7739264
Human chromosome chr6
Human SNP position 19785357
Pig chromosome chr7
Pig SNP position 16134298
2.Annotation Information
PubMed ID23104006
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23104006
StudyGenome-wide association meta-analysis identifies new endometriosis risk loci.
Disease/TraitEndometriosis
Initial sample3,181 European ancestry cases, 8,075 European ancestry controls, 1,423 Japanese ancestry cases, 1,318 Japanese ancestry controls
Replication sample1,044 Japanese ancestry, 4,017 Japanese ancestry controls
Region6p22.3
Chromosome idchr6
Chromosome position19785357
Reported geneNR
Mapped geneLOC105374962 - LOC100506885
Upstream gene id105374962
Downstream gene id100506885
SNP gene ids
Upstream gene distance34900
Downstream gene distance18349
SNP risk allelers7739264-T
SNPsrs7739264
Merged0
SNP id current7739264
Contextintron_variant
Intergenic1
Allele frequency0.515
P value0.0000000004
Pvalue mlog9.39794000867203
P value text
Or beta1.17
%95 Ci[1.11-1.23]
PlatformIllumina [407632]
CNVN
Mapped traitendometriosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001065
Study accessionGCST001720