Human SNP ID | rs7739264 |
---|---|
Human chromosome | chr6 |
Human SNP position | 19785357 |
Pig chromosome | chr7 |
Pig SNP position | 16134298 |
PubMed ID | 23104006 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23104006 |
Study | Genome-wide association meta-analysis identifies new endometriosis risk loci. |
Disease/Trait | Endometriosis |
Initial sample | 3,181 European ancestry cases, 8,075 European ancestry controls, 1,423 Japanese ancestry cases, 1,318 Japanese ancestry controls |
Replication sample | 1,044 Japanese ancestry, 4,017 Japanese ancestry controls |
Region | 6p22.3 |
Chromosome id | chr6 |
Chromosome position | 19785357 |
Reported gene | NR |
Mapped gene | LOC105374962 - LOC100506885 |
Upstream gene id | 105374962 |
Downstream gene id | 100506885 |
SNP gene ids | |
Upstream gene distance | 34900 |
Downstream gene distance | 18349 |
SNP risk allele | rs7739264-T |
SNPs | rs7739264 |
Merged | 0 |
SNP id current | 7739264 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.515 |
P value | 0.0000000004 |
Pvalue mlog | 9.39794000867203 |
P value text | |
Or beta | 1.17 |
%95 Ci | [1.11-1.23] |
Platform | Illumina [407632] |
CNV | N |
Mapped trait | endometriosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001065 |
Study accession | GCST001720 |