SNP Detail For rs7735940
1.Mapping Information
Human SNP ID rs7735940
Human chromosome chr5
Human SNP position 36423829
Pig chromosome chr16
Pig SNP position 22718214
2.Annotation Information
PubMed ID21626137
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21626137
StudyTwo-marker association tests yield new disease associations for coronary artery disease and hypertension.
Disease/TraitHypertension
Initial sample~2,000 European ancestry cases, ~3,000 European ancestry controls
Replication sampleNA
Region5p13.2
Chromosome idchr5;5
Chromosome position36425491;36423829
Reported geneRANBP3L
Mapped geneLOC105374725 - SLC1A3; LOC105374725 - SLC1A3
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers12522034-C; rs7735940-A
SNPsrs12522034; rs7735940
Merged0
SNP id current
Contextintergenic_variant; intergenic_variant
Intergenic
Allele frequencyNR
P value0.0000000000005
Pvalue mlog12.3010299956639
P value text
Or beta
%95 Ci
PlatformAffymetrix [405022]
CNVN
Mapped traithypertension
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000537
Study accessionGCST001085