Human SNP ID | rs7735563 |
---|---|
Human chromosome | chr5 |
Human SNP position | 131429243 |
Pig chromosome | chr2 |
Pig SNP position | 139031885 |
PubMed ID | 25918132 |
---|---|
Journal | Toxicol Sci |
Link | www.ncbi.nlm.nih.gov/pubmed/25918132 |
Study | Genome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma. |
Disease/Trait | Diisocyanate-induced asthma |
Initial sample | 74 European ancestry cases, 824 European ancestry controls |
Replication sample | NA |
Region | 5q31.1 |
Chromosome id | chr5 |
Chromosome position | 131429243 |
Reported gene | RAPGEF6, CDC42SE2, FNIP1 |
Mapped gene | RAPGEF6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51735 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7735563-G |
SNPs | rs7735563 |
Merged | 0 |
SNP id current | 7735563 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.008 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 6.67 |
%95 Ci | [2.75-16.17] |
Platform | Illumina [1556551] |
CNV | N |
Mapped trait | response to diisocyanate, asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270 |
Study accession | GCST002875 |