SNP Detail For rs7735563
1.Mapping Information
Human SNP ID rs7735563
Human chromosome chr5
Human SNP position 131429243
Pig chromosome chr2
Pig SNP position 139031885
2.Annotation Information
PubMed ID25918132
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/25918132
StudyGenome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma.
Disease/TraitDiisocyanate-induced asthma
Initial sample74 European ancestry cases, 824 European ancestry controls
Replication sampleNA
Region5q31.1
Chromosome idchr5
Chromosome position131429243
Reported geneRAPGEF6, CDC42SE2, FNIP1
Mapped geneRAPGEF6
Upstream gene id
Downstream gene id
SNP gene ids51735
Upstream gene distance
Downstream gene distance
SNP risk allelers7735563-G
SNPsrs7735563
Merged0
SNP id current7735563
Contextintron_variant
Intergenic0
Allele frequency0.008
P value0.000001
Pvalue mlog6
P value text
Or beta6.67
%95 Ci[2.75-16.17]
PlatformIllumina [1556551]
CNVN
Mapped traitresponse to diisocyanate, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002875