SNP Detail For rs77329626
1.Mapping Information
Human SNP ID rs77329626
Human chromosome chr10
Human SNP position 59904437
Pig chromosome chr14
Pig SNP position 68272139
2.Annotation Information
PubMed ID26053186
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26053186
StudyMercapturic Acids Derived from the Toxicants Acrolein and Crotonaldehyde in the Urine of Cigarette Smokers from Five Ethnic Groups with Differing Risks for Lung Cancer.
Disease/Trait3-hydroxypropylmercapturic acid levels in smokers
Initial sample362 African American current smoker individuals, 329 Native Hawaiian ancestry current smoker individuals, 438 European ancestry current smoker individuals, 449 Latino current smoker individuals, 704 Japanese ancestry current smoker individuals
Replication sampleNA
Region10q21.2
Chromosome idchr10
Chromosome position59904437
Reported geneNR
Mapped geneCCDC6
Upstream gene id
Downstream gene id
SNP gene ids8030
Upstream gene distance
Downstream gene distance
SNP risk allelers77329626-?
SNPsrs77329626
Merged
SNP id current77329626
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text(AA)
Or beta1.4476
%95 Ci[NR] unit decrease
PlatformIllumina [up to 11892802] (imputed)
CNVN
Mapped traitsmoking behavior, 3-hydroxypropylmercapturic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0007014
Study accessionGCST002956