Human SNP ID | rs7728043 |
---|---|
Human chromosome | chr5 |
Human SNP position | 5897581 |
Pig chromosome | chr16 |
Pig SNP position | 82305023 |
PubMed ID | 20031603 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20031603 |
Study | A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project. |
Disease/Trait | QT interval |
Initial sample | 2,325 European ancestry individuals |
Replication sample | NA |
Region | 5p15.32 |
Chromosome id | chr5 |
Chromosome position | 5897581 |
Reported gene | intergenic |
Mapped gene | LOC105374637 - LOC101929214 |
Upstream gene id | 105374637 |
Downstream gene id | 101929214 |
SNP gene ids | |
Upstream gene distance | 47116 |
Downstream gene distance | 34495 |
SNP risk allele | rs7728043-G |
SNPs | rs7728043 |
Merged | 0 |
SNP id current | 7728043 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.48 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 0.14 |
%95 Ci | [0.08-0.20] unit decrease |
Platform | Illumina [~ 318327] |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST000452 |