SNP Detail For rs7728043
1.Mapping Information
Human SNP ID rs7728043
Human chromosome chr5
Human SNP position 5897581
Pig chromosome chr16
Pig SNP position 82305023
2.Annotation Information
PubMed ID20031603
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20031603
StudyA genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
Disease/TraitQT interval
Initial sample2,325 European ancestry individuals
Replication sampleNA
Region5p15.32
Chromosome idchr5
Chromosome position5897581
Reported geneintergenic
Mapped geneLOC105374637 - LOC101929214
Upstream gene id105374637
Downstream gene id101929214
SNP gene ids
Upstream gene distance47116
Downstream gene distance34495
SNP risk allelers7728043-G
SNPsrs7728043
Merged0
SNP id current7728043
Contextintergenic_variant
Intergenic1
Allele frequency0.48
P value0.000001
Pvalue mlog6
P value text
Or beta0.14
%95 Ci[0.08-0.20] unit decrease
PlatformIllumina [~ 318327]
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST000452