SNP Detail For rs77253690
1.Mapping Information
Human SNP ID rs77253690
Human chromosome chr11
Human SNP position 60424840
Pig chromosome chr2
Pig SNP position 10821720
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region11q12.2
Chromosome idchr11
Chromosome position60424840
Reported geneIntergenic
Mapped geneMS4A14 - MS4A5
Upstream gene id84689
Downstream gene id64232
SNP gene ids
Upstream gene distance7084
Downstream gene distance4749
SNP risk allelers77253690-G
SNPsrs77253690
Merged0
SNP id current77253690
Contextupstream_gene_variant
Intergenic1
Allele frequency0.97
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.228
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262