SNP Detail For rs771998
1.Mapping Information
Human SNP ID rs771998
Human chromosome chr12
Human SNP position 51964411
Pig chromosome chr5
Pig SNP position 17912733
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region12q13.13
Chromosome idchr12
Chromosome position51964411
Reported geneACVR1B
Mapped geneACVR1B
Upstream gene id
Downstream gene id
SNP gene ids91
Upstream gene distance
Downstream gene distance
SNP risk allelers771998-T
SNPsrs771998
Merged0
SNP id current771998
Contextintron_variant
Intergenic0
Allele frequency0.599
P value0.000001
Pvalue mlog6
P value text
Or beta0.009
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264