SNP Detail For rs7719624
1.Mapping Information
Human SNP ID rs7719624
Human chromosome chr5
Human SNP position 136041877
Pig chromosome chr2
Pig SNP position 143868460
2.Annotation Information
PubMed ID24483146
JournalBMC Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/24483146
StudyDiscovery of genetic biomarkers contributing to variation in drug response of cytidine analogues using human lymphoblastoid cell lines.
Disease/TraitResponse to cytidine analogues (gemcitabine)
Initial sample60 European ancestry lymphoblastoid cell lines, 54 African American lymphoblastoid cell lines, 60 Han Chinese ancestry lymphoblastoid cell lines
Replication sampleNA
Region5q31.1
Chromosome idchr5
Chromosome position136041877
Reported geneTGFBI
Mapped geneTGFBI
Upstream gene id
Downstream gene id
SNP gene ids7045
Upstream gene distance
Downstream gene distance
SNP risk allelers7719624-?
SNPsrs7719624
Merged0
SNP id current7719624
Contextintron_variant
Intergenic0
Allele frequency
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [1348798]
CNVN
Mapped traitresponse to gemcitabine
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0036272
Study accessionGCST002343