Human SNP ID | rs7715172 |
---|---|
Human chromosome | chr5 |
Human SNP position | 38452792 |
Pig chromosome | chr16 |
Pig SNP position | 24886129 |
PubMed ID | 22760553 |
---|---|
Journal | Transl Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/22760553 |
Study | Genome-wide pharmacogenomic study of citalopram-induced side effects in STAR*D. |
Disease/Trait | Response to citalopram treatment |
Initial sample | 1,392 European ancestry depression cases, 264 African American depression cases, 106 depression cases |
Replication sample | NA |
Region | 5p13.1 |
Chromosome id | chr5 |
Chromosome position | 38452792 |
Reported gene | EGFLAM |
Mapped gene | EGFLAM |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 133584 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7715172-G |
SNPs | rs7715172 |
Merged | 0 |
SNP id current | 7715172 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.071 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (EA + AA - GSE) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [421789] |
CNV | N |
Mapped trait | response to antidepressant |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0036276 |
Study accession | GCST001591 |