SNP Detail For rs7715172
1.Mapping Information
Human SNP ID rs7715172
Human chromosome chr5
Human SNP position 38452792
Pig chromosome chr16
Pig SNP position 24886129
2.Annotation Information
PubMed ID22760553
JournalTransl Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22760553
StudyGenome-wide pharmacogenomic study of citalopram-induced side effects in STAR*D.
Disease/TraitResponse to citalopram treatment
Initial sample1,392 European ancestry depression cases, 264 African American depression cases, 106 depression cases
Replication sampleNA
Region5p13.1
Chromosome idchr5
Chromosome position38452792
Reported geneEGFLAM
Mapped geneEGFLAM
Upstream gene id
Downstream gene id
SNP gene ids133584
Upstream gene distance
Downstream gene distance
SNP risk allelers7715172-G
SNPsrs7715172
Merged0
SNP id current7715172
Contextintron_variant
Intergenic0
Allele frequency0.071
P value0.000003
Pvalue mlog5.52287874528033
P value text(EA + AA - GSE)
Or beta
%95 Ci
PlatformAffymetrix [421789]
CNVN
Mapped traitresponse to antidepressant
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0036276
Study accessionGCST001591