SNP Detail For rs7714670
1.Mapping Information
Human SNP ID rs7714670
Human chromosome chr5
Human SNP position 73776529
Pig chromosome chr2
Pig SNP position 84440958
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region5q13.2 x 14q12
Chromosome idchr5 x 14
Chromosome position73776529 x 27454979
Reported geneNR x NR
Mapped geneARHGEF28 x LOC728755
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers7714670-C x rs12880735-A
SNPsrs7714670 x rs12880735
Merged0
SNP id current
Contextmissense_variant x intron_variant
Intergenic
Allele frequency
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta1.52
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913