SNP Detail For rs7712914
1.Mapping Information
Human SNP ID rs7712914
Human chromosome chr5
Human SNP position 43494112
Pig chromosome chr16
Pig SNP position 29653188
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region5p12
Chromosome idchr5
Chromosome position43494112
Reported geneC5orf34
Mapped geneC5orf34, LOC105374749
Upstream gene id
Downstream gene id
SNP gene ids375444, 105374749
Upstream gene distance
Downstream gene distance
SNP risk allelers7712914-G
SNPsrs7712914
Merged0
SNP id current7712914
Contextintron_variant
Intergenic0
Allele frequency0.963
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.075
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265