SNP Detail For rs7712671
1.Mapping Information
Human SNP ID rs7712671
Human chromosome chr5
Human SNP position 117201554
Pig chromosome chr2
Pig SNP position 126183720
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region5q23.1
Chromosome idchr5
Chromosome position117201554
Reported geneNR
Mapped geneLOC105379137 - LOC105379138
Upstream gene id105379137
Downstream gene id105379138
SNP gene ids
Upstream gene distance248127
Downstream gene distance70380
SNP risk allelers7712671-G
SNPsrs7712671
Merged
SNP id current7712671
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta1.0526316
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048